Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase complex protein llde | SAMN04487898_113154 | Not Available | Positive | 4529976 - 4530713 | 27450.7 |
| aaa domain-containing protein | SAMN04487898_113155 | Not Available | Positive | 4531134 - 4537001 | 219638.0 |
| uncharacterized conserved protein ybcv, duf1398 family | SAMN04487898_113156 | Not Available | Negative | 4537034 - 4538239 | 45614.7 |
| hypothetical protein | SAMN04487898_113157 | Not Available | Negative | 4538516 - 4538803 | 11217.3 |
| hepn domain-containing protein | SAMN04487898_113158 | Not Available | Negative | 4538845 - 4539738 | 34154.0 |
| helix-turn-helix domain-containing protein | SAMN04487898_113159 | Not Available | Positive | 4540067 - 4540360 | 10993.2 |
| ser-trna(thr) hydrolase /threonyl-trna synthetase | SAMN04487898_113160 | Not Available | Positive | 4540801 - 4542726 | 72944.1 |
| translation initiation factor if-3 | SAMN04487898_113161 | Not Available | Positive | 4542740 - 4543309 | 21482.3 |
| large subunit ribosomal protein l35 | SAMN04487898_113162 | Not Available | Positive | 4543336 - 4543536 | 7340.22 |
| lsu ribosomal protein l20p | SAMN04487898_113163 | Not Available | Positive | 4543610 - 4543954 | 12980.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

