Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_113144 | Not Available | Positive | 4510000 - 4511262 | 47070.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_113145 | Not Available | Positive | 4511486 - 4514689 | 118718.0 |
| starch-binding associating with outer membrane | SAMN04487898_113146 | Not Available | Positive | 4514701 - 4516650 | 74480.3 |
| protein of unknown function | SAMN04487898_113147 | Not Available | Positive | 4516677 - 4517843 | 42723.0 |
| f5/8 type c domain-containing protein | SAMN04487898_113148 | Not Available | Positive | 4517860 - 4518969 | 40927.7 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04487898_113149 | Not Available | Positive | 4518997 - 4522668 | 137659.0 |
| imidazolonepropionase | SAMN04487898_113150 | Not Available | Negative | 4522690 - 4525923 | 119915.0 |
| atp-dependent dna helicase recq | SAMN04487898_113151 | Not Available | Positive | 4526000 - 4527892 | 71650.5 |
| putative auto-transporter adhesin, head gin domain | SAMN04487898_113152 | Not Available | Positive | 4527897 - 4528607 | 25280.4 |
| mfs transporter, umf1 family | SAMN04487898_113153 | Not Available | Positive | 4528653 - 4529966 | 48857.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

