Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose/galactose transporter | SAMN04487898_113134 | Not Available | Negative | 4490035 - 4491309 | 46300.0 |
| sugar phosphate isomerase/epimerase | SAMN04487898_113135 | Not Available | Negative | 4491299 - 4492117 | 31318.0 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04487898_113136 | Not Available | Negative | 4492119 - 4493018 | 34357.6 |
| hypothetical protein | SAMN04487898_113137 | Not Available | Negative | 4493047 - 4496187 | 120894.0 |
| laci family transcriptional regulator | SAMN04487898_113138 | Not Available | Positive | 4496541 - 4497617 | 41322.9 |
| right handed beta helix region | SAMN04487898_113139 | Not Available | Negative | 4497614 - 4499761 | 80487.0 |
| hypothetical protein | SAMN04487898_113140 | Not Available | Negative | 4499781 - 4502483 | 102553.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_113141 | Not Available | Positive | 4502843 - 4506016 | 116726.0 |
| starch-binding associating with outer membrane | SAMN04487898_113142 | Not Available | Positive | 4506032 - 4507669 | 62054.2 |
| beta-glucosidase | SAMN04487898_113143 | Not Available | Positive | 4507761 - 4509977 | 81545.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

