Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_113124 | Not Available | Positive | 4480883 - 4481098 | 8249.8 |
| predicted amidohydrolase | SAMN04487898_113125 | Not Available | Negative | 4481100 - 4482605 | 57696.9 |
| peroxiredoxin | SAMN04487898_113126 | Not Available | Negative | 4482666 - 4483850 | 44550.2 |
| holliday junction dna helicase subunit ruvb | SAMN04487898_113127 | Not Available | Negative | 4483889 - 4484911 | 37575.2 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN04487898_113128 | Not Available | Negative | 4484952 - 4485839 | 31743.7 |
| pyridoxamine 5'-phosphate oxidase | SAMN04487898_113129 | Not Available | Negative | 4485872 - 4486522 | 24788.3 |
| putative transcriptional regulator | SAMN04487898_113130 | Not Available | Positive | 4486572 - 4487135 | 21284.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN04487898_113131 | Not Available | Negative | 4487150 - 4487632 | 16885.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN04487898_113132 | Not Available | Negative | 4487633 - 4488772 | 42561.4 |
| hypothetical protein | SAMN04487898_113133 | Not Available | Positive | 4488830 - 4490020 | 43623.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

