Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf1015 family | SAMN04487898_11393 | Not Available | Positive | 4447501 - 4448745 | 46805.5 |
| heme-degrading monooxygenase hmoa | SAMN04487898_11394 | Not Available | Negative | 4448888 - 4449172 | 10904.2 |
| hypothetical protein | SAMN04487898_11395 | Not Available | Negative | 4449182 - 4449961 | 29318.5 |
| phosphate starvation-inducible protein phoh | SAMN04487898_11396 | Not Available | Positive | 4450064 - 4451032 | 35806.6 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN04487898_11397 | Not Available | Positive | 4451068 - 4452012 | 35617.6 |
| anti-anti-sigma factor | SAMN04487898_11398 | Not Available | Positive | 4452151 - 4452537 | 14247.2 |
| ribonuclease z | SAMN04487898_11399 | Not Available | Positive | 4452537 - 4453448 | 34472.4 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04487898_113100 | Not Available | Negative | 4453504 - 4454448 | 33822.9 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04487898_113101 | Not Available | Negative | 4454467 - 4455312 | 31560.7 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04487898_113102 | Not Available | Negative | 4455353 - 4456231 | 32641.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

