Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04487898_11363 | Not Available | Negative | 4416414 - 4417541 | 41835.0 |
| sigma-70 region 2 | SAMN04487898_11364 | Not Available | Negative | 4417621 - 4418193 | 22331.3 |
| transcriptional regulator, y4mf family | SAMN04487898_11365 | Not Available | Positive | 4418998 - 4419216 | 7894.73 |
| serine/threonine-protein kinase hipa | SAMN04487898_11366 | Not Available | Positive | 4419213 - 4419548 | 12795.1 |
| serine/threonine-protein kinase hipa | SAMN04487898_11367 | Not Available | Positive | 4419538 - 4420485 | 36020.7 |
| uncharacterized conserved protein, duf885 familyt | SAMN04487898_11368 | Not Available | Positive | 4420650 - 4422422 | 67238.5 |
| hypothetical protein | SAMN04487898_11369 | Not Available | Positive | 4422573 - 4423373 | 30294.6 |
| nad(p)h-dependent fmn reductase | SAMN04487898_11370 | Not Available | Positive | 4423393 - 4423929 | 19976.9 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04487898_11371 | Not Available | Negative | 4424198 - 4424641 | 17095.5 |
| osmoprotectant transport system permease protein | SAMN04487898_11372 | Not Available | Negative | 4424864 - 4426438 | 58138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

