Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11353 | Not Available | Positive | 4400885 - 4401661 | 30147.1 |
| site-specific recombinase xerd | SAMN04487898_11354 | Not Available | Negative | 4401765 - 4402835 | 40885.4 |
| Trna-ser | Not Available | Not Available | Positive | 4402982 - 4403071 | Not Available |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04487898_11356 | Not Available | Positive | 4403278 - 4403688 | 15620.8 |
| alpha-l-rhamnosidase | SAMN04487898_11357 | Not Available | Negative | 4403697 - 4405952 | 84140.2 |
| hypothetical protein | SAMN04487898_11358 | Not Available | Negative | 4405960 - 4407840 | 70012.7 |
| hypothetical protein | SAMN04487898_11359 | Not Available | Negative | 4407866 - 4409671 | 64817.5 |
| fad dependent oxidoreductase | SAMN04487898_11360 | Not Available | Negative | 4409676 - 4411268 | 59136.5 |
| starch-binding associating with outer membrane | SAMN04487898_11361 | Not Available | Negative | 4411295 - 4412737 | 53916.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11362 | Not Available | Negative | 4412769 - 4416296 | 129443.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

