Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11343 | Not Available | Negative | 4389132 - 4389260 | 4529.61 |
| uncharacterized conserved protein, contains parb-like and hnh nuclease domains | SAMN04487898_11344 | Not Available | Negative | 4389612 - 4391381 | 69499.6 |
| hypothetical protein | SAMN04487898_11345 | Not Available | Negative | 4391589 - 4392266 | 26981.5 |
| hypothetical protein | SAMN04487898_11346 | Not Available | Negative | 4392279 - 4393181 | 34302.1 |
| kap family p-loop domain-containing protein | SAMN04487898_11347 | Not Available | Positive | 4393564 - 4397313 | 145150.0 |
| hypothetical protein | SAMN04487898_11348 | Not Available | Positive | 4397344 - 4398360 | 39392.3 |
| hypothetical protein | SAMN04487898_11349 | Not Available | Negative | 4398541 - 4399182 | 24671.8 |
| hypothetical protein | SAMN04487898_11350 | Not Available | Negative | 4399169 - 4400173 | 38299.7 |
| hypothetical protein | SAMN04487898_11351 | Not Available | Positive | 4400330 - 4400623 | 11851.8 |
| helix-turn-helix domain-containing protein | SAMN04487898_11352 | Not Available | Positive | 4400613 - 4400825 | 7839.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

