Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, bacteroides expansion family 1 | SAMN04487898_101319 | Not Available | Positive | 459030 - 459602 | 22804.5 |
| fecr family protein | SAMN04487898_101320 | Not Available | Positive | 459952 - 461166 | 44447.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101321 | Not Available | Positive | 461390 - 464779 | 124175.0 |
| starch-binding associating with outer membrane | SAMN04487898_101322 | Not Available | Positive | 464805 - 466229 | 52606.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_101323 | Not Available | Positive | 466446 - 467021 | 22378.3 |
| fecr family protein | SAMN04487898_101324 | Not Available | Positive | 467098 - 468246 | 42202.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101325 | Not Available | Positive | 468423 - 471806 | 125403.0 |
| starch-binding associating with outer membrane | SAMN04487898_101326 | Not Available | Positive | 471818 - 473377 | 57631.9 |
| glycosyl hydrolases related to gh101 family, ghl1-ghl3 | SAMN04487898_101327 | Not Available | Positive | 473452 - 475473 | 76254.2 |
| hypothetical protein | SAMN04487898_101328 | Not Available | Positive | 475473 - 478022 | 95303.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

