Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hepn domain-containing protein | SAMN04487898_11333 | Not Available | Negative | 4377785 - 4378678 | 34001.9 |
| hypothetical protein | SAMN04487898_11334 | Not Available | Positive | 4379063 - 4379383 | 12193.9 |
| hypothetical protein | SAMN04487898_11335 | Not Available | Negative | 4379438 - 4379887 | 17683.1 |
| hlyd family secretion protein | SAMN04487898_11336 | Not Available | Negative | 4380091 - 4381428 | 50597.9 |
| atp-binding cassette, subfamily b | SAMN04487898_11337 | Not Available | Negative | 4381436 - 4383655 | 84036.2 |
| hypothetical protein | SAMN04487898_11338 | Not Available | Negative | 4383804 - 4384580 | 29568.6 |
| hypothetical protein | SAMN04487898_11339 | Not Available | Negative | 4384592 - 4385653 | 37873.6 |
| ctp:phosphocholine cytidylyltransferase | SAMN04487898_11340 | Not Available | Negative | 4385705 - 4386460 | 29636.7 |
| licd family protein | SAMN04487898_11341 | Not Available | Negative | 4386471 - 4387685 | 47075.9 |
| hypothetical protein | SAMN04487898_11342 | Not Available | Positive | 4387875 - 4389185 | 51097.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

