Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04487898_11323 | Not Available | Positive | 4370095 - 4371744 | 60673.1 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04487898_11324 | Not Available | Positive | 4371762 - 4373108 | 50170.5 |
| sugar phosphate isomerase/epimerase | SAMN04487898_11325 | Not Available | Positive | 4373139 - 4374008 | 32124.7 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04487898_11326 | Not Available | Positive | 4374032 - 4375234 | 43414.5 |
| hypothetical protein | SAMN04487898_11327 | Not Available | Negative | 4375305 - 4375838 | 20189.6 |
| hypothetical protein | SAMN04487898_11328 | Not Available | Negative | 4375845 - 4376138 | 11307.9 |
| hypothetical protein | SAMN04487898_11329 | Not Available | Negative | 4376148 - 4376324 | 6602.01 |
| acetyltransferase (gnat) domain-containing protein | SAMN04487898_11330 | Not Available | Negative | 4376278 - 4376727 | 17367.8 |
| protein of unknown function | SAMN04487898_11331 | Not Available | Negative | 4376950 - 4377222 | 9981.94 |
| hypothetical protein | SAMN04487898_11332 | Not Available | Negative | 4377453 - 4377743 | 11428.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

