Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11313 | Not Available | Positive | 4356467 - 4356880 | 15320.5 |
| arac-type dna-binding protein | SAMN04487898_11314 | Not Available | Negative | 4356930 - 4357790 | 33315.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11315 | Not Available | Positive | 4357926 - 4358471 | 21067.5 |
| fecr family protein | SAMN04487898_11316 | Not Available | Positive | 4358556 - 4359488 | 34752.8 |
| tonb-dependent receptor plug domain | SAMN04487898_11317 | Not Available | Positive | 4359667 - 4362990 | 124308.0 |
| hypothetical protein | SAMN04487898_11318 | Not Available | Positive | 4363014 - 4363772 | 28783.8 |
| thioredoxin | SAMN04487898_11319 | Not Available | Negative | 4363945 - 4364238 | 10907.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11320 | Not Available | Negative | 4364391 - 4364981 | 22920.7 |
| fecr family protein | SAMN04487898_11321 | Not Available | Positive | 4365412 - 4366554 | 42335.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11322 | Not Available | Positive | 4366692 - 4370081 | 122995.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

