Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04487898_1133 | Not Available | Negative | 4349230 - 4350015 | 30160.6 |
| hypothetical protein | SAMN04487898_1134 | Not Available | Negative | 4350015 - 4350449 | 16029.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_1135 | Not Available | Negative | 4350524 - 4351096 | 21940.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04487898_1136 | Not Available | Negative | 4351166 - 4351759 | 21184.6 |
| thioredoxin reductase | SAMN04487898_1137 | Not Available | Negative | 4351779 - 4352690 | 33031.6 |
| hypothetical protein | SAMN04487898_1138 | Not Available | Negative | 4352691 - 4352912 | 8420.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04487898_1139 | Not Available | Positive | 4353260 - 4354684 | 52243.4 |
| rhodanese-related sulfurtransferase | SAMN04487898_11310 | Not Available | Positive | 4354696 - 4355016 | 11821.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487898_11311 | Not Available | Positive | 4355042 - 4355884 | 31849.0 |
| hypothetical protein | SAMN04487898_11312 | Not Available | Positive | 4355881 - 4356438 | 20016.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

