Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_112205 | Not Available | Positive | 4340519 - 4341262 | 28434.1 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04487898_112206 | Not Available | Negative | 4341360 - 4342442 | 39486.5 |
| l-lactate dehydrogenase complex protein lldg | SAMN04487898_112207 | Not Available | Negative | 4342498 - 4343121 | 23842.6 |
| cell division protease ftsh | SAMN04487898_112208 | Not Available | Negative | 4343209 - 4345290 | 76584.4 |
| ribosome-associated protein | SAMN04487898_112209 | Not Available | Negative | 4345318 - 4345692 | 14289.8 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04487898_112210 | Not Available | Positive | 4345825 - 4346511 | 25563.9 |
| 6-phosphofructokinase | SAMN04487898_112211 | Not Available | Positive | 4346570 - 4347553 | 34997.3 |
| transposase dde domain-containing protein | SAMN04487898_112212 | Not Available | Negative | 4347725 - 4347895 | 6443.02 |
| hypothetical protein | SAMN04487898_1131 | Not Available | Negative | 4347896 - 4348188 | 11053.2 |
| hypothetical protein | SAMN04487898_1132 | Not Available | Negative | 4348648 - 4349169 | 19728.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

