Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_112195 | Not Available | Positive | 4331178 - 4331777 | 22055.8 |
| apag protein | SAMN04487898_112196 | Not Available | Negative | 4331779 - 4332165 | 14562.1 |
| pp_03496 | SAMN04487898_112197 | Not Available | Negative | 4332200 - 4333207 | Not Available |
| hypothetical protein | SAMN04487898_112198 | Not Available | Positive | 4333261 - 4334169 | 34477.9 |
| phosphatidate cytidylyltransferase | SAMN04487898_112199 | Not Available | Positive | 4334166 - 4334975 | 30486.0 |
| hypothetical protein | SAMN04487898_112200 | Not Available | Negative | 4334972 - 4335190 | 8465.63 |
| transcription-repair coupling factor | SAMN04487898_112201 | Not Available | Negative | 4335201 - 4338542 | 127010.0 |
| protein of unknown function | SAMN04487898_112202 | Not Available | Positive | 4338707 - 4339042 | 12639.0 |
| tm2 domain-containing protein | SAMN04487898_112203 | Not Available | Positive | 4339035 - 4339394 | 13636.8 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN04487898_112204 | Not Available | Positive | 4339422 - 4340519 | 40691.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

