Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_112185 | Not Available | Positive | 4314575 - 4317889 | 126226.0 |
| rrna maturation rnase ybey | SAMN04487898_112186 | Not Available | Positive | 4317901 - 4318335 | 16709.0 |
| atp-binding cassette, subfamily f, uup | SAMN04487898_112187 | Not Available | Positive | 4319032 - 4320894 | 71041.1 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN04487898_112188 | Not Available | Positive | 4321114 - 4322976 | 69263.0 |
| ig-like domain-containing protein | SAMN04487898_112189 | Not Available | Positive | 4323120 - 4324748 | 61487.9 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN04487898_112190 | Not Available | Negative | 4324749 - 4325258 | 18390.4 |
| l-aspartate oxidase | SAMN04487898_112191 | Not Available | Negative | 4325262 - 4326848 | 59385.9 |
| quinolinate synthetase | SAMN04487898_112192 | Not Available | Positive | 4327450 - 4328442 | 36758.5 |
| thiamine-monophosphate kinase | SAMN04487898_112193 | Not Available | Positive | 4328487 - 4329527 | 38243.9 |
| dna recombination protein rmuc | SAMN04487898_112194 | Not Available | Negative | 4329522 - 4330889 | 52119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

