Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_112155 | Not Available | Positive | 4281948 - 4284116 | 75146.9 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN04487898_112156 | Not Available | Positive | 4284384 - 4286969 | 98005.4 |
| hypothetical protein | SAMN04487898_112157 | Not Available | Negative | 4287031 - 4287282 | 9055.91 |
| thioredoxin | SAMN04487898_112158 | Not Available | Negative | 4287279 - 4287590 | 11571.9 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN04487898_112159 | Not Available | Negative | 4287607 - 4288239 | 23512.6 |
| hypothetical protein | SAMN04487898_112160 | Not Available | Negative | 4288401 - 4289609 | 44537.9 |
| aldehyde dehydrogenase (nad+) | SAMN04487898_112161 | Not Available | Positive | 4289684 - 4291084 | 51693.7 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN04487898_112162 | Not Available | Negative | 4291087 - 4291914 | 30628.8 |
| polyisoprenoid-binding protein ycei | SAMN04487898_112163 | Not Available | Negative | 4291971 - 4292543 | 20897.9 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN04487898_112164 | Not Available | Positive | 4292690 - 4293412 | 26917.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

