Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_101309 | Not Available | Positive | 443505 - 444581 | 40093.4 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_101310 | Not Available | Positive | 444586 - 445686 | 41432.7 |
| solute:na+ symporter, sss family | SAMN04487898_101311 | Not Available | Negative | 445780 - 447465 | 61069.2 |
| l-arabinose isomerase | SAMN04487898_101312 | Not Available | Negative | 447526 - 449016 | 55236.2 |
| l-ribulose 5-phosphate 4-epimerase | SAMN04487898_101313 | Not Available | Negative | 449040 - 449738 | 25880.8 |
| l-ribulokinase | SAMN04487898_101314 | Not Available | Negative | 449744 - 451423 | 61139.1 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04487898_101315 | Not Available | Negative | 451512 - 452222 | 27471.4 |
| aldose 1-epimerase | SAMN04487898_101316 | Not Available | Positive | 452345 - 453520 | 42680.4 |
| signal transduction histidine kinase | SAMN04487898_101317 | Not Available | Positive | 453618 - 457706 | 156122.0 |
| phopq-activated pathogenicity-related protein | SAMN04487898_101318 | Not Available | Positive | 457793 - 459001 | 45053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

