Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha2 family, multidrug resistance protein | SAMN04487898_112145 | Not Available | Positive | 4265075 - 4266622 | 56245.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_112146 | Not Available | Positive | 4266786 - 4267385 | 23613.6 |
| fecr family protein | SAMN04487898_112147 | Not Available | Positive | 4267459 - 4268505 | 39157.4 |
| tonb-dependent receptor | SAMN04487898_112148 | Not Available | Positive | 4268709 - 4272230 | 130610.0 |
| protein of unknown function | SAMN04487898_112149 | Not Available | Positive | 4272230 - 4273969 | 63410.0 |
| hypothetical protein | SAMN04487898_112150 | Not Available | Positive | 4273969 - 4275189 | 45716.8 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04487898_112151 | Not Available | Positive | 4275236 - 4276285 | 38553.0 |
| hypothetical protein | SAMN04487898_112152 | Not Available | Positive | 4276295 - 4277626 | 49274.8 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04487898_112153 | Not Available | Positive | 4277629 - 4278627 | 36011.2 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04487898_112154 | Not Available | Positive | 4278658 - 4281915 | 121215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

