Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb superfamily protein | SAMN04487898_112135 | Not Available | Positive | 4256665 - 4257168 | 19534.3 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | SAMN04487898_112136 | Not Available | Positive | 4257165 - 4257587 | 15414.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04487898_112137 | Not Available | Negative | 4257588 - 4258250 | 25671.1 |
| quaternary ammonium compound-resistance protein suge | SAMN04487898_112138 | Not Available | Positive | 4258262 - 4258585 | 11818.8 |
| protein of unknown function | SAMN04487898_112139 | Not Available | Negative | 4258599 - 4259153 | 20664.1 |
| hypothetical protein | SAMN04487898_112140 | Not Available | Negative | 4259187 - 4259366 | 6413.93 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN04487898_112141 | Not Available | Negative | 4259429 - 4261942 | 95111.9 |
| transcriptional regulator, tetr family | SAMN04487898_112142 | Not Available | Positive | 4262074 - 4262700 | 23501.8 |
| outer membrane protein tolc | SAMN04487898_112143 | Not Available | Positive | 4262690 - 4264006 | 48774.6 |
| membrane fusion protein, multidrug efflux system | SAMN04487898_112144 | Not Available | Positive | 4264028 - 4265071 | 37540.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

