Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m49 | SAMN04487898_112125 | Not Available | Positive | 4244261 - 4245943 | 62742.4 |
| two-component system, cell cycle response regulator divk | SAMN04487898_112126 | Not Available | Negative | 4245936 - 4246298 | 13350.0 |
| two-component system, chemotaxis family, response regulator cheb | SAMN04487898_112127 | Not Available | Negative | 4246320 - 4246883 | 20468.7 |
| chemotaxis protein methyltransferase cher | SAMN04487898_112128 | Not Available | Negative | 4246883 - 4247704 | 31951.3 |
| response regulator receiver domain-containing protein | SAMN04487898_112129 | Not Available | Negative | 4247708 - 4248085 | 13635.7 |
| signal transduction histidine kinase | SAMN04487898_112130 | Not Available | Negative | 4248111 - 4251701 | 134715.0 |
| signal transduction histidine kinase | SAMN04487898_112131 | Not Available | Negative | 4251714 - 4252838 | 42071.9 |
| hypothetical protein | SAMN04487898_112132 | Not Available | Negative | 4252961 - 4253800 | 30372.8 |
| glutamyl-trna synthetase | SAMN04487898_112133 | Not Available | Negative | 4253872 - 4255380 | 56864.1 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04487898_112134 | Not Available | Positive | 4255470 - 4256687 | 46666.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

