Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | SAMN04487898_112115 | Not Available | Positive | 4234739 - 4236484 | 66094.2 |
| hypothetical protein | SAMN04487898_112116 | Not Available | Negative | 4236542 - 4236994 | 16873.5 |
| putative holin-x, holin superfamily iii | SAMN04487898_112117 | Not Available | Negative | 4236969 - 4237352 | 14672.8 |
| gas vesicle protein | SAMN04487898_112118 | Not Available | Negative | 4237376 - 4237645 | 9585.25 |
| predicted purr-regulated permease perm | SAMN04487898_112119 | Not Available | Negative | 4237698 - 4238750 | 38957.0 |
| two-component system, ntrc family, response regulator hydg | SAMN04487898_112120 | Not Available | Negative | 4238765 - 4240165 | 52634.3 |
| enoyl-coa hydratase | SAMN04487898_112121 | Not Available | Negative | 4240319 - 4241101 | 27913.6 |
| methylmalonyl-coa mutase, c-terminal domain | SAMN04487898_112122 | Not Available | Negative | 4241105 - 4241524 | 15078.6 |
| glutaminyl-trna synthetase | SAMN04487898_112123 | Not Available | Positive | 4241605 - 4243266 | 63714.4 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04487898_112124 | Not Available | Negative | 4243303 - 4244142 | 31209.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

