Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(adenine34) deaminase | SAMN04487898_112105 | Not Available | Negative | 4226253 - 4226726 | 17292.8 |
| pp_03405 | SAMN04487898_112106 | Not Available | Negative | 4226742 - 4227077 | Not Available |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04487898_112107 | Not Available | Positive | 4227163 - 4228347 | 43972.6 |
| hypothetical protein | SAMN04487898_112108 | Not Available | Negative | 4228405 - 4228644 | 8683.96 |
| predicted arabinose efflux permease, mfs family | SAMN04487898_112109 | Not Available | Negative | 4228657 - 4230201 | 56438.4 |
| hypothetical protein | SAMN04487898_112110 | Not Available | Negative | 4230382 - 4231431 | 40687.6 |
| membrane protein terc, possibly involved in tellurium resistance | SAMN04487898_112111 | Not Available | Negative | 4231441 - 4232232 | 28947.5 |
| hypothetical protein | SAMN04487898_112112 | Not Available | Negative | 4232313 - 4233524 | 42959.0 |
| hypothetical protein | SAMN04487898_112113 | Not Available | Negative | 4233521 - 4234045 | 20403.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_112114 | Not Available | Negative | 4234032 - 4234592 | 21692.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

