Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11295 | Not Available | Positive | 4217060 - 4217365 | 10975.1 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04487898_11296 | Not Available | Positive | 4217394 - 4218071 | 24804.7 |
| dna polymerase i | SAMN04487898_11297 | Not Available | Negative | 4218245 - 4221058 | 105003.0 |
| hypothetical protein | SAMN04487898_11298 | Not Available | Positive | 4221173 - 4221835 | 23851.8 |
| dna-3-methyladenine glycosylase i | SAMN04487898_11299 | Not Available | Negative | 4221837 - 4222424 | 22277.9 |
| methylated-dna-protein-cysteine methyltransferase related protein | SAMN04487898_112100 | Not Available | Negative | 4222426 - 4222752 | 12012.6 |
| trna (guanine-n7-)-methyltransferase | SAMN04487898_112101 | Not Available | Negative | 4222766 - 4223416 | 25221.3 |
| gdp-l-fucose synthase | SAMN04487898_112102 | Not Available | Positive | 4223542 - 4224471 | 34890.8 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN04487898_112103 | Not Available | Positive | 4224511 - 4225443 | 35375.4 |
| superoxide dismutase, fe-mn family | SAMN04487898_112104 | Not Available | Negative | 4225530 - 4226135 | 22329.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

