Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | SAMN04487898_11285 | Not Available | Negative | 4206369 - 4207436 | 38861.2 |
| pyrroline-5-carboxylate reductase | SAMN04487898_11286 | Not Available | Negative | 4207442 - 4208260 | 28309.4 |
| n-acetylglutamate kinase | SAMN04487898_11287 | Not Available | Negative | 4208263 - 4209054 | 28057.2 |
| n-succinyl-l-ornithine transcarbamylase | SAMN04487898_11288 | Not Available | Negative | 4209060 - 4210022 | 35982.3 |
| acetylornithine aminotransferase | SAMN04487898_11289 | Not Available | Negative | 4210019 - 4211152 | 41052.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN04487898_11290 | Not Available | Negative | 4211246 - 4212214 | 35515.7 |
| argininosuccinate synthase | SAMN04487898_11291 | Not Available | Negative | 4212207 - 4213397 | 43919.4 |
| hypothetical protein | SAMN04487898_11292 | Not Available | Negative | 4213411 - 4214115 | 26701.7 |
| glycine/d-amino acid oxidase | SAMN04487898_11293 | Not Available | Negative | 4214508 - 4215710 | 45107.3 |
| peptidase family m28 | SAMN04487898_11294 | Not Available | Positive | 4215840 - 4216982 | 41739.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

