Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00255 family protein | SAMN04487898_11275 | Not Available | Positive | 4196637 - 4197512 | 33087.0 |
| guanylate kinase | SAMN04487898_11276 | Not Available | Positive | 4197519 - 4198088 | 21572.7 |
| nicotinate-nucleotide adenylyltransferase | SAMN04487898_11277 | Not Available | Positive | 4198151 - 4198723 | 21788.3 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04487898_11278 | Not Available | Negative | 4198720 - 4199427 | 26076.8 |
| hypothetical protein | SAMN04487898_11279 | Not Available | Positive | 4199730 - 4201112 | 53223.5 |
| transcriptional regulator, hxlr family | SAMN04487898_11280 | Not Available | Negative | 4201173 - 4201556 | 14530.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04487898_11281 | Not Available | Positive | 4201652 - 4202392 | 25614.8 |
| hypothetical protein | SAMN04487898_11282 | Not Available | Positive | 4202832 - 4203092 | 10234.2 |
| peptide chain release factor 3 | SAMN04487898_11283 | Not Available | Positive | 4203380 - 4204960 | 59749.6 |
| argininosuccinate lyase | SAMN04487898_11284 | Not Available | Negative | 4205015 - 4206346 | 49570.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

