Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide a dehydrogenase | SAMN04487898_101299 | Not Available | Positive | 431795 - 432811 | 36493.1 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04487898_101300 | Not Available | Negative | 432856 - 433365 | 19376.8 |
| photosynthetic reaction center cytochrome c subunit | SAMN04487898_101301 | Not Available | Negative | 433449 - 433856 | 15441.0 |
| dna-binding transcriptional regulator, lrp family | SAMN04487898_101302 | Not Available | Negative | 433948 - 434445 | 18956.1 |
| hypothetical protein | SAMN04487898_101303 | Not Available | Positive | 434694 - 435122 | 16423.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_101304 | Not Available | Positive | 435295 - 435861 | 22146.8 |
| fecr family protein | SAMN04487898_101305 | Not Available | Positive | 435942 - 437042 | 40818.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_101306 | Not Available | Positive | 437200 - 440760 | 129458.0 |
| susd family protein | SAMN04487898_101307 | Not Available | Positive | 440780 - 442210 | 52405.6 |
| glutathione peroxidase, house-cleaning role in reducing lipid peroxides | SAMN04487898_101308 | Not Available | Positive | 442279 - 443487 | 44497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

