Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nusa antitermination factor | SAMN04487898_11245 | Not Available | Negative | 4161604 - 4162839 | 46770.8 |
| ribosome maturation factor rimp | SAMN04487898_11246 | Not Available | Negative | 4162842 - 4163306 | 17357.9 |
| hypothetical protein | SAMN04487898_11247 | Not Available | Negative | 4163437 - 4163874 | 16067.4 |
| putative membrane protein | SAMN04487898_11248 | Not Available | Positive | 4163893 - 4164243 | 12204.5 |
| cyanophycin synthetase | SAMN04487898_11249 | Not Available | Negative | 4164338 - 4166953 | 95836.7 |
| cyanophycinase | SAMN04487898_11250 | Not Available | Positive | 4167227 - 4168102 | 31051.4 |
| l-asparaginase | SAMN04487898_11251 | Not Available | Positive | 4168109 - 4168951 | 30128.4 |
| uncharacterized protein | SAMN04487898_11252 | Not Available | Negative | 4169133 - 4171451 | 84808.0 |
| pyruvate dehydrogenase e1 component beta subunit | SAMN04487898_11253 | Not Available | Negative | 4171605 - 4172591 | 36032.6 |
| uvrd-like helicase c-terminal domain-containing protein | SAMN04487898_11254 | Not Available | Negative | 4172701 - 4175616 | 110520.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

