Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_11235 | Not Available | Negative | 4150173 - 4151126 | 37102.4 |
| protein of unknown function, duf268 | SAMN04487898_11236 | Not Available | Positive | 4151416 - 4152144 | 27706.3 |
| methyltransferase, fkbm family | SAMN04487898_11237 | Not Available | Positive | 4152151 - 4153050 | 34858.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_11238 | Not Available | Positive | 4153052 - 4153939 | 34802.0 |
| glycosyl transferase family 11 | SAMN04487898_11239 | Not Available | Positive | 4153936 - 4154790 | 33717.1 |
| glycosyl transferase family 2 | SAMN04487898_11240 | Not Available | Positive | 4154775 - 4155815 | 40387.8 |
| putative methyltransferase, lic12133 family | SAMN04487898_11241 | Not Available | Negative | 4155776 - 4156291 | 19726.7 |
| hypothetical protein | SAMN04487898_11242 | Not Available | Negative | 4156387 - 4157763 | 50835.4 |
| hypothetical protein | SAMN04487898_11243 | Not Available | Negative | 4157765 - 4158037 | 10371.6 |
| translation initiation factor if-2 | SAMN04487898_11244 | Not Available | Negative | 4158452 - 4161487 | 109450.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

