Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN04487898_11225 | Not Available | Negative | 4138958 - 4139338 | 13758.4 |
| ompa-ompf porin, oop family | SAMN04487898_11226 | Not Available | Negative | 4139586 - 4140944 | 47954.1 |
| lao/ao transport system kinase | SAMN04487898_11227 | Not Available | Negative | 4141290 - 4142177 | 32291.2 |
| glycosyltransferase sugar-binding region containing dxd motif-containing protein | SAMN04487898_11228 | Not Available | Positive | 4142268 - 4142924 | 25725.2 |
| hypothetical protein | SAMN04487898_11229 | Not Available | Positive | 4142985 - 4143863 | 34713.6 |
| glycosyltransferase, gt2 family | SAMN04487898_11230 | Not Available | Positive | 4143869 - 4144855 | 38177.1 |
| atp-binding cassette, subfamily b, msba | SAMN04487898_11231 | Not Available | Positive | 4144907 - 4146733 | 67493.5 |
| glycosyl transferase family 2 | SAMN04487898_11232 | Not Available | Positive | 4146740 - 4147492 | 29406.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04487898_11233 | Not Available | Positive | 4147493 - 4149256 | 68940.1 |
| glycosyltransferase like family protein | SAMN04487898_11234 | Not Available | Negative | 4149251 - 4150123 | 32842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

