Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxyl-terminal processing protease | SAMN04487898_11215 | Not Available | Negative | 4127663 - 4129843 | 81524.4 |
| hypothetical protein | SAMN04487898_11216 | Not Available | Negative | 4129990 - 4130634 | 23749.3 |
| protein of unknown function | SAMN04487898_11217 | Not Available | Negative | 4130747 - 4131316 | 21674.8 |
| protein-tyrosine phosphatase | SAMN04487898_11218 | Not Available | Negative | 4131328 - 4131786 | 17779.3 |
| s1/p1 nuclease | SAMN04487898_11219 | Not Available | Negative | 4131770 - 4132612 | 31707.3 |
| hypothetical protein | SAMN04487898_11220 | Not Available | Negative | 4132622 - 4133116 | 18685.4 |
| fumarase, class ii | SAMN04487898_11221 | Not Available | Negative | 4133137 - 4134534 | 49719.7 |
| cubico group peptidase, beta-lactamase class c family | SAMN04487898_11222 | Not Available | Positive | 4134697 - 4135932 | 47008.5 |
| atp-dependent dna helicase recg | SAMN04487898_11223 | Not Available | Negative | 4135933 - 4138038 | 80040.0 |
| chloramphenicol-sensitive protein rard | SAMN04487898_11224 | Not Available | Negative | 4138043 - 4138954 | 34646.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

