Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twitching motility two-component system response regulator pilg | SAMN04487898_1125 | Not Available | Positive | 4119179 - 4119571 | 14642.9 |
| snoal-like domain-containing protein | SAMN04487898_1126 | Not Available | Positive | 4119613 - 4120086 | 17962.2 |
| histidyl-trna synthetase | SAMN04487898_1127 | Not Available | Negative | 4120083 - 4121468 | 51455.2 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04487898_1128 | Not Available | Negative | 4121555 - 4123168 | 56323.3 |
| pyruvate dehydrogenase e1 component alpha subunit | SAMN04487898_1129 | Not Available | Negative | 4123226 - 4124221 | 36991.3 |
| hypothetical protein | SAMN04487898_11210 | Not Available | Negative | 4124422 - 4124565 | 5519.86 |
| lipoprotein spr | SAMN04487898_11211 | Not Available | Positive | 4124618 - 4125172 | 20817.0 |
| capsule synthesis protein pga_cap | SAMN04487898_11212 | Not Available | Positive | 4125243 - 4126343 | 39884.9 |
| hypothetical protein | SAMN04487898_11213 | Not Available | Negative | 4126340 - 4126564 | 8081.34 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04487898_11214 | Not Available | Positive | 4126666 - 4127595 | 34571.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

