Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase, n-terminal domain | SAMN04487898_111164 | Not Available | Positive | 4106326 - 4107873 | 56883.6 |
| chromosomal replication initiator protein dnaa | SAMN04487898_111165 | Not Available | Positive | 4108068 - 4109498 | 53953.2 |
| nudix domain-containing protein | SAMN04487898_111166 | Not Available | Negative | 4109570 - 4110118 | 20933.0 |
| uncharacterized protein | SAMN04487898_111167 | Not Available | Negative | 4110130 - 4110903 | 26308.8 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN04487898_111168 | Not Available | Negative | 4110907 - 4111350 | 16064.2 |
| lema protein | SAMN04487898_111169 | Not Available | Negative | 4111433 - 4112014 | 21441.7 |
| hypothetical protein | SAMN04487898_111170 | Not Available | Positive | 4112074 - 4113687 | 58990.4 |
| hypothetical protein | SAMN04487898_111171 | Not Available | Positive | 4113786 - 4114145 | 13259.0 |
| hypothetical protein | SAMN04487898_1121 | Not Available | Negative | 4115164 - 4115494 | 12430.0 |
| iron complex outermembrane recepter protein | SAMN04487898_1124 | Not Available | Negative | 4116132 - 4118432 | 83867.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

