Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrochelatase | SAMN04487898_111154 | Not Available | Positive | 4096736 - 4097749 | 38159.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04487898_111155 | Not Available | Negative | 4097739 - 4098965 | 46120.5 |
| udp-glucose dehydrogenase | SAMN04487898_111156 | Not Available | Positive | 4099029 - 4100339 | 48134.9 |
| dtdp-glucose 4,6-dehydratase | SAMN04487898_111157 | Not Available | Positive | 4100339 - 4101328 | 37213.7 |
| udp-glucose 4-epimerase | SAMN04487898_111158 | Not Available | Positive | 4101336 - 4102358 | 37408.3 |
| hypothetical protein | SAMN04487898_111159 | Not Available | Positive | 4102359 - 4102925 | 22004.1 |
| dtdp-glucose 4,6-dehydratase | SAMN04487898_111160 | Not Available | Positive | 4102956 - 4104008 | 39836.4 |
| putative abc transport system permease protein | SAMN04487898_111161 | Not Available | Negative | 4104017 - 4105246 | 44016.2 |
| iron-sulfur cluster assembly protein | SAMN04487898_111162 | Not Available | Negative | 4105334 - 4105687 | 12794.1 |
| hypothetical protein | SAMN04487898_111163 | Not Available | Positive | 4105793 - 4106323 | 20094.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

