Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN04487898_111144 | Not Available | Positive | 4085914 - 4088508 | 98715.8 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04487898_111145 | Not Available | Positive | 4088578 - 4089765 | 43501.5 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04487898_111146 | Not Available | Positive | 4089868 - 4090905 | 39310.9 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN04487898_111147 | Not Available | Positive | 4090906 - 4091322 | 14709.9 |
| transcriptional regulator, tetr family | SAMN04487898_111148 | Not Available | Positive | 4091322 - 4091897 | 22275.9 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN04487898_111149 | Not Available | Positive | 4092216 - 4093664 | 54583.4 |
| hypothetical protein | SAMN04487898_111150 | Not Available | Positive | 4093683 - 4094087 | 15265.4 |
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04487898_111151 | Not Available | Positive | 4094262 - 4094771 | 19253.8 |
| hypothetical protein | SAMN04487898_111152 | Not Available | Positive | 4094797 - 4095759 | 36408.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04487898_111153 | Not Available | Positive | 4095814 - 4096662 | 31928.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

