Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_111134 | Not Available | Positive | 4067826 - 4067945 | 4758.75 |
| hypothetical protein | SAMN04487898_111135 | Not Available | Positive | 4068399 - 4068845 | 17113.1 |
| beta-glucosidase | SAMN04487898_111136 | Not Available | Negative | 4069133 - 4071448 | 84570.8 |
| hypothetical protein | SAMN04487898_111137 | Not Available | Negative | 4071472 - 4072851 | 52058.5 |
| starch-binding associating with outer membrane | SAMN04487898_111138 | Not Available | Negative | 4072912 - 4074402 | 54772.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_111139 | Not Available | Negative | 4074414 - 4077482 | 110377.0 |
| ligand-binding sensor domain-containing protein | SAMN04487898_111140 | Not Available | Negative | 4077741 - 4080629 | 111007.0 |
| upf0176 protein | SAMN04487898_111141 | Not Available | Negative | 4080645 - 4081583 | 35074.6 |
| bleomycin hydrolase | SAMN04487898_111142 | Not Available | Positive | 4081921 - 4083108 | 43811.8 |
| carboxypepd_reg-like domain-containing protein | SAMN04487898_111143 | Not Available | Negative | 4083200 - 4085647 | 93144.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

