Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN04487898_111124 | Not Available | Negative | 4057316 - 4058773 | 53537.6 |
| cytochrome c | SAMN04487898_111125 | Not Available | Negative | 4058815 - 4059225 | 14275.2 |
| sugar phosphate isomerase/epimerase | SAMN04487898_111126 | Not Available | Negative | 4059329 - 4060387 | 39558.6 |
| predicted dehydrogenase | SAMN04487898_111127 | Not Available | Negative | 4060394 - 4061554 | 42293.0 |
| choline dehydrogenase | SAMN04487898_111128 | Not Available | Negative | 4061554 - 4063257 | 63660.2 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04487898_111129 | Not Available | Negative | 4063279 - 4063968 | 25041.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN04487898_111130 | Not Available | Positive | 4064232 - 4065176 | 35385.3 |
| dna-binding regulatory protein, yebc/pmpr family | SAMN04487898_111131 | Not Available | Positive | 4065236 - 4065961 | 27153.0 |
| alpha/beta hydrolase family protein | SAMN04487898_111132 | Not Available | Negative | 4065973 - 4066758 | 29538.4 |
| hypothetical protein | SAMN04487898_111133 | Not Available | Positive | 4066926 - 4067579 | 25533.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

