Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f5/8 type c domain-containing protein | SAMN04487898_101289 | Not Available | Positive | 415153 - 418539 | 126167.0 |
| hypothetical protein | SAMN04487898_101290 | Not Available | Positive | 418568 - 420586 | 75962.5 |
| ribulose-bisphosphate carboxylase large chain | SAMN04487898_101291 | Not Available | Positive | 420598 - 421842 | 44743.8 |
| uncharacterized conserved protein ygbk, duf1537 family | SAMN04487898_101292 | Not Available | Positive | 421856 - 423238 | 49735.6 |
| asp/glu/hydantoin racemase | SAMN04487898_101293 | Not Available | Positive | 423252 - 423914 | 23165.4 |
| bile acid:na+ symporter, bass family | SAMN04487898_101294 | Not Available | Positive | 423921 - 425234 | 47919.5 |
| sialate o-acetylesterase | SAMN04487898_101295 | Not Available | Positive | 425221 - 426666 | 52987.5 |
| hypothetical protein | SAMN04487898_101296 | Not Available | Positive | 426611 - 428953 | 88930.5 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN04487898_101297 | Not Available | Positive | 429059 - 430969 | 72096.1 |
| l-fucose dehydrogenase | SAMN04487898_101298 | Not Available | Positive | 430983 - 431771 | 27971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

