Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel | SAMN04487898_111104 | Not Available | Positive | 4035306 - 4036880 | 58348.8 |
| hypothetical protein | SAMN04487898_111105 | Not Available | Positive | 4036882 - 4037874 | 36960.5 |
| adenosylhomocysteinase | SAMN04487898_111106 | Not Available | Negative | 4037963 - 4039279 | 48323.9 |
| putative bacilliredoxin, yphp/yqiw family | SAMN04487898_111107 | Not Available | Positive | 4039500 - 4039910 | 14820.9 |
| signal transduction histidine kinase | SAMN04487898_111108 | Not Available | Negative | 4039968 - 4042328 | 88824.2 |
| tigr00159 family protein | SAMN04487898_111109 | Not Available | Negative | 4042431 - 4043222 | 29707.9 |
| dihydropteroate synthase | SAMN04487898_111110 | Not Available | Negative | 4043293 - 4044150 | 31470.1 |
| protein of unknown function | SAMN04487898_111111 | Not Available | Positive | 4044221 - 4044763 | 20494.8 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN04487898_111112 | Not Available | Positive | 4044763 - 4045914 | 43046.0 |
| peptide/nickel transport system permease protein | SAMN04487898_111113 | Not Available | Positive | 4045917 - 4046972 | 39089.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

