Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11184 | Not Available | Positive | 4011322 - 4013175 | 69084.4 |
| hypothetical protein | SAMN04487898_11185 | Not Available | Positive | 4013156 - 4014514 | 51485.7 |
| hypothetical protein | SAMN04487898_11186 | Not Available | Positive | 4014557 - 4015453 | 33584.5 |
| nadph:quinone reductase | SAMN04487898_11187 | Not Available | Positive | 4015473 - 4016486 | 36066.2 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04487898_11188 | Not Available | Negative | 4016483 - 4017373 | 34726.4 |
| protein of unknown function | SAMN04487898_11189 | Not Available | Negative | 4017384 - 4018181 | 29587.2 |
| tonb-dependent receptor plug domain | SAMN04487898_11190 | Not Available | Negative | 4018185 - 4020830 | 98054.6 |
| fecr family protein | SAMN04487898_11191 | Not Available | Negative | 4020872 - 4021861 | 37013.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11192 | Not Available | Negative | 4021931 - 4022539 | 23833.6 |
| hypothetical protein | SAMN04487898_11193 | Not Available | Positive | 4022723 - 4022944 | 8264.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

