Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04487898_11174 | Not Available | Positive | 4000985 - 4001746 | 27957.4 |
| n-terminal ig-like domain of cellulase | SAMN04487898_11175 | Not Available | Positive | 4001817 - 4004096 | 86514.0 |
| smp-30/gluconolaconase/lre-like region-containing protein | SAMN04487898_11176 | Not Available | Positive | 4004104 - 4007148 | 112904.0 |
| Trna-asn | Not Available | Not Available | Positive | 4007192 - 4007268 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 4007554 - 4007630 | Not Available |
| sugar or nucleoside kinase, ribokinase family | SAMN04487898_11179 | Not Available | Positive | 4007772 - 4008692 | 33806.9 |
| predicted heme/steroid binding protein | SAMN04487898_11180 | Not Available | Negative | 4008749 - 4008988 | 9230.91 |
| hypothetical protein | SAMN04487898_11181 | Not Available | Negative | 4008981 - 4009592 | 23558.9 |
| protein of unknown function | SAMN04487898_11182 | Not Available | Positive | 4009661 - 4010557 | 33986.4 |
| hypothetical protein | SAMN04487898_11183 | Not Available | Positive | 4010622 - 4011296 | 25209.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

