Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerol transferase mdob | SAMN04487898_11164 | Not Available | Positive | 3982748 - 3984670 | 73036.9 |
| hypothetical protein | SAMN04487898_11165 | Not Available | Negative | 3984748 - 3985833 | 39691.0 |
| tonb-dependent receptor | SAMN04487898_11166 | Not Available | Negative | 3985843 - 3989100 | 121348.0 |
| fecr family protein | SAMN04487898_11167 | Not Available | Negative | 3989278 - 3990189 | 34106.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11168 | Not Available | Negative | 3990297 - 3990914 | 24357.2 |
| hypothetical protein | SAMN04487898_11169 | Not Available | Negative | 3991079 - 3991354 | 10779.9 |
| two component regulator propeller | SAMN04487898_11170 | Not Available | Negative | 3992354 - 3995236 | 109869.0 |
| hypothetical protein | SAMN04487898_11171 | Not Available | Positive | 3995447 - 3995689 | 8668.79 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_11172 | Not Available | Positive | 3995702 - 3998989 | 121591.0 |
| starch-binding associating with outer membrane | SAMN04487898_11173 | Not Available | Positive | 3999001 - 4000980 | 72914.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

