Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487898_11154 | Not Available | Negative | 3969511 - 3971388 | 71235.2 |
| dihydrolipoamide dehydrogenase | SAMN04487898_11155 | Not Available | Positive | 3971487 - 3972890 | 49960.6 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04487898_11156 | Not Available | Negative | 3973013 - 3976204 | 115933.0 |
| rnd family efflux transporter, mfp subunit | SAMN04487898_11157 | Not Available | Negative | 3976212 - 3977276 | 37999.9 |
| outer membrane protein tolc | SAMN04487898_11158 | Not Available | Negative | 3977276 - 3978616 | 49574.2 |
| transcriptional regulator, tetr family | SAMN04487898_11159 | Not Available | Negative | 3978624 - 3979235 | 23301.2 |
| transcriptional regulator, tetr family | SAMN04487898_11160 | Not Available | Negative | 3979344 - 3979961 | 23704.7 |
| udp-n-acetylmuramate dehydrogenase | SAMN04487898_11161 | Not Available | Positive | 3980045 - 3981124 | 39258.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11162 | Not Available | Positive | 3981292 - 3981822 | 20288.5 |
| pap2 superfamily protein | SAMN04487898_11163 | Not Available | Positive | 3981961 - 3982737 | 29098.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

