Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa | SAMN04487898_11144 | Not Available | Positive | 3956652 - 3957140 | 17949.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SAMN04487898_11145 | Not Available | Positive | 3957137 - 3958036 | 32308.9 |
| deoxyribodipyrimidine photo-lyase | SAMN04487898_11146 | Not Available | Negative | 3958041 - 3959381 | 52595.0 |
| hypothetical protein | SAMN04487898_11147 | Not Available | Negative | 3959356 - 3960261 | 33281.5 |
| deoxyribodipyrimidine photo-lyase | SAMN04487898_11148 | Not Available | Positive | 3960516 - 3961808 | 48903.1 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN04487898_11149 | Not Available | Positive | 3961976 - 3964771 | 105292.0 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN04487898_11150 | Not Available | Positive | 3964791 - 3966014 | 43018.1 |
| hypothetical protein | SAMN04487898_11151 | Not Available | Positive | 3966132 - 3967022 | 34050.7 |
| protein of unknown function | SAMN04487898_11152 | Not Available | Positive | 3967147 - 3967848 | 27297.4 |
| peptidase family m1 | SAMN04487898_11153 | Not Available | Negative | 3967845 - 3969503 | 62889.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

