Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated c-terminal domain-containing protein | SAMN04487898_11134 | Not Available | Positive | 3930774 - 3942407 | 402257.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04487898_11135 | Not Available | Positive | 3942473 - 3943441 | 35862.1 |
| wd40-like beta propeller repeat | SAMN04487898_11136 | Not Available | Positive | 3943443 - 3945170 | 64501.5 |
| long-chain acyl-coa synthetase | SAMN04487898_11137 | Not Available | Positive | 3945643 - 3947415 | 66378.0 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN04487898_11138 | Not Available | Positive | 3947393 - 3949108 | 61804.2 |
| ompa-ompf porin, oop family | SAMN04487898_11139 | Not Available | Positive | 3949237 - 3950556 | 46438.1 |
| dna-binding transcriptional regulator, marr family | SAMN04487898_11140 | Not Available | Positive | 3950691 - 3951149 | 17085.7 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN04487898_11141 | Not Available | Positive | 3951130 - 3953490 | 87248.3 |
| acetyl-coa acyltransferase | SAMN04487898_11142 | Not Available | Positive | 3953514 - 3954692 | 41846.7 |
| acyl-coa dehydrogenase | SAMN04487898_11143 | Not Available | Positive | 3954706 - 3956496 | 65599.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

