Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-acetylglucosaminidase | SAMN04487898_110133 | Not Available | Negative | 3835601 - 3837808 | 85048.0 |
| predicted acyltransferase | SAMN04487898_110134 | Not Available | Negative | 3837819 - 3839018 | 44915.8 |
| calcineurin-like phosphoesterase | SAMN04487898_110135 | Not Available | Negative | 3839019 - 3839939 | 34700.3 |
| starch-binding associating with outer membrane | SAMN04487898_110136 | Not Available | Negative | 3840111 - 3841787 | 61701.9 |
| iron complex outermembrane recepter protein | SAMN04487898_110137 | Not Available | Negative | 3841805 - 3844843 | 109322.0 |
| inositol oxygenase | SAMN04487898_110138 | Not Available | Negative | 3844935 - 3845861 | 36834.1 |
| transcriptional regulator, laci family | SAMN04487898_110139 | Not Available | Positive | 3845976 - 3846992 | 37476.6 |
| alpha-1,2-mannosidase, putative | SAMN04487898_110140 | Not Available | Positive | 3847111 - 3849429 | 87244.6 |
| glycosyl hydrolases family 28 | SAMN04487898_110141 | Not Available | Positive | 3849476 - 3850954 | 53389.7 |
| hypothetical protein | SAMN04487898_110142 | Not Available | Negative | 3850980 - 3851396 | 15343.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

