Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxyl-terminal processing protease | SAMN04487898_110123 | Not Available | Positive | 3817674 - 3819296 | 59683.9 |
| peroxiredoxin | SAMN04487898_110124 | Not Available | Positive | 3819321 - 3820466 | 42765.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_110125 | Not Available | Positive | 3820730 - 3821290 | 21890.5 |
| fecr family protein | SAMN04487898_110126 | Not Available | Positive | 3821359 - 3822552 | 44120.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_110127 | Not Available | Positive | 3822705 - 3826145 | 125712.0 |
| starch-binding associating with outer membrane | SAMN04487898_110128 | Not Available | Positive | 3826158 - 3827720 | 57617.4 |
| hypothetical protein | SAMN04487898_110129 | Not Available | Positive | 3827701 - 3828783 | 39554.4 |
| hexosaminidase | SAMN04487898_110130 | Not Available | Positive | 3828838 - 3830724 | 71397.8 |
| hypothetical protein | SAMN04487898_110131 | Not Available | Positive | 3830738 - 3833899 | 119599.0 |
| solute:na+ symporter, sss family | SAMN04487898_110132 | Not Available | Negative | 3833949 - 3835577 | 59777.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

