Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1 | SAMN04487898_110113 | Not Available | Positive | 3800864 - 3802279 | 52030.6 |
| alpha-glucosidase | SAMN04487898_110114 | Not Available | Positive | 3802276 - 3804180 | 71065.7 |
| hypothetical protein | SAMN04487898_110115 | Not Available | Positive | 3804187 - 3807033 | 107329.0 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04487898_110116 | Not Available | Positive | 3807082 - 3807711 | 22785.7 |
| predicted oxidoreductase | SAMN04487898_110117 | Not Available | Positive | 3807867 - 3808916 | 38926.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN04487898_110118 | Not Available | Positive | 3809074 - 3809664 | 23598.5 |
| fecr family protein | SAMN04487898_110119 | Not Available | Positive | 3809756 - 3810790 | 39208.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_110120 | Not Available | Positive | 3810846 - 3814412 | 132197.0 |
| susd family protein | SAMN04487898_110121 | Not Available | Positive | 3814439 - 3815788 | 50803.6 |
| thiol-disulfide isomerase or thioredoxin | SAMN04487898_110122 | Not Available | Positive | 3815789 - 3817669 | 70740.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

