Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function, duf255 | SAMN04487898_110103 | Not Available | Positive | 3780549 - 3781742 | 44778.6 |
| histidine kinase | SAMN04487898_110104 | Not Available | Positive | 3781871 - 3784600 | 103034.0 |
| two component transcriptional regulator, lyttr family | SAMN04487898_110105 | Not Available | Positive | 3784600 - 3785361 | 28946.3 |
| histidine kinase | SAMN04487898_110106 | Not Available | Negative | 3785391 - 3787199 | 69088.5 |
| regulatory protein, gntr family | SAMN04487898_110107 | Not Available | Negative | 3787841 - 3788857 | 39307.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_110108 | Not Available | Positive | 3789190 - 3792366 | 116277.0 |
| starch-binding associating with outer membrane | SAMN04487898_110109 | Not Available | Positive | 3792385 - 3793959 | 59491.6 |
| protein of unknown function | SAMN04487898_110110 | Not Available | Positive | 3793953 - 3794873 | 34229.7 |
| hypothetical protein | SAMN04487898_110111 | Not Available | Positive | 3794870 - 3797458 | 97552.0 |
| hypothetical protein | SAMN04487898_110112 | Not Available | Positive | 3797467 - 3800877 | 128029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

