Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter sp. ok626 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2049762 bp
Thymine Count
2048164 bp
Guanine Count
1337759 bp
Cytosine Count
1326840 bp
Genome Length
6763971 bp
Protein-coding Genes
5456 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN04487898_11093 | Not Available | Positive | 3767170 - 3768468 | 48524.3 |
| peroxiredoxin | SAMN04487898_11094 | Not Available | Positive | 3768495 - 3769898 | 52556.5 |
| disulphide bond corrector protein dsbc | SAMN04487898_11095 | Not Available | Positive | 3769909 - 3770358 | 16818.8 |
| thioredoxin-like | SAMN04487898_11096 | Not Available | Positive | 3770406 - 3770948 | 19816.2 |
| protein of unknown function | SAMN04487898_11097 | Not Available | Positive | 3770972 - 3771670 | 25910.5 |
| serine protease do | SAMN04487898_11098 | Not Available | Positive | 3771700 - 3773382 | 60748.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04487898_11099 | Not Available | Positive | 3773541 - 3774140 | 22899.5 |
| fecr family protein | SAMN04487898_110100 | Not Available | Positive | 3774097 - 3775383 | 48389.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04487898_110101 | Not Available | Positive | 3775631 - 3779098 | 127147.0 |
| susd family protein | SAMN04487898_110102 | Not Available | Positive | 3779118 - 3780494 | 51085.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

